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111 bytes added
, 14:31, 8 February 2012
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| bin/samtools index bams/$file.bam | | bin/samtools index bams/$file.bam |
| end | | end |
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| + | Once we finish the read mapping step and generate bam files for all samples, we can step to variant calling. |
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| == Calling variants and Inferring genotypes == | | == Calling variants and Inferring genotypes == |