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The <code>--first_n_record</code> option followed by a number, '''n''', will enable qplot to read the first '''n''' reads to test the bam files and verify it works.
The <code>--first_n_record</code> option followed by a number, '''n''', will enable qplot to read the first '''n''' reads to test the bam files and verify it works.
* Lanes to process
* Lanes to process (only works for Illumina sequences)
If the input bam files have more than one lane and only some of them need to be checked, use something like <code>--lanes 1,3,5</code> to specify that only lanes 1, 3, and 5 need to be checked.
If the input bam files have more than one lane and only some of them need to be checked, use something like <code>--lanes 1,3,5</code> to specify that only lanes 1, 3, and 5 need to be checked.
