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; --vcf
; --vcf
: This option specifies that the provided --refHaps file is saved in the [http://www.1000genomes.org/wiki/Analysis/vcf4.0 VCF format] - no --refSNPs file needed.
: This option specifies that the provided --refHaps file is provided in [http://www.1000genomes.org/wiki/Analysis/vcf4.0 VCF format] , no --refSNPs file needed.
; --snpAliases [filename]
; --snpAliases [filename]
