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== Variant Annotation ==
 
== Variant Annotation ==
 
*[[vcfCodingSnps]] - Annotate coding variants in a VCF file.
 
*[[vcfCodingSnps]] - Annotate coding variants in a VCF file.
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== Quality Control ==
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*[[GenotypeIDcheck]] - Check that mapped reads are consistent with known genotypes for each individual.
      
== File Conversion ==
 
== File Conversion ==

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