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Required input files are --reference, --regions and input.bam
Required input files are --reference, --regions and input.bam
* An example --regions file is a BEF file and looks like the following:
* An example --regions file is a BED file and looks like the following:
1 1000 2000 GENE1
1 1000 2000 GENE1
1 5000 6000 GENE1
1 5000 6000 GENE1
