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LibStatGen: FASTQ

666 bytes added, 14:01, 22 February 2010
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*** myPlusLine
*** myQualityString
 
 
== Libraries & Classes ==
*libfqf.a
**BaseCount - wrapper around an array that has one index per base and an extra index for a total count of all bases. This class is used to keep a count of the number of times each index has occurred. It can print a percentage of the occurrence of each base against the total number of bases.
**BaseComposition - class that tracks the composition of base by read location.
**FastQFile - class that reads/validates a fastq file.
*libcsg.a
**String (StringBasics) - String class for string operations
**BaseAsciiMap - Class for determining if a character is a valid base.
**InputFile - Class for opening and operating on a file.

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