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From Genome Analysis Wiki
Minimac
,→Multiprocessor Version
The current version of minimac comes in two flavours, <code>minimac</code> and <code>minimac-omp</code>. The latter version uses the [[OpenMP]] protocol to support multi-threading, resulting in faster throughput.
BE AWARE: since this version of minimac runs everything in parallel the sample order in the output files (*dose, *haps,...) will vary between runs. Therefore, e.g. chunks have to be merged by sample id.
== Change log ==