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, 12:17, 21 February 2013
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| Installation instructions [[GotCloud#Setup|here]]. | | Installation instructions [[GotCloud#Setup|here]]. |
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− | ==Mapping Reads== | + | == STEP 2 : Run GotCloud Alignment Pipeline == |
| The first step in processing next generation sequence data is mapping the reads to the reference genome, generating per sample BAM files. | | The first step in processing next generation sequence data is mapping the reads to the reference genome, generating per sample BAM files. |
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