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G. Jun, M. Flickinger, K. N. Hetrick, Kurt, J. M. Romm, K. F. Doheny, G. Abecasis, M. Boehnke,and H. M. Kang, ''Detecting and Estimating Contamination of Human DNA Samples in Sequencing and Array-Based Genotype Data'', American journal of human genetics doi:10.1016/j.ajhg.2012.09.004 (volume 91 issue 5 pp.839 - 848)
G. Jun, M. Flickinger, K. N. Hetrick, Kurt, J. M. Romm, K. F. Doheny, G. Abecasis, M. Boehnke,and H. M. Kang, ''Detecting and Estimating Contamination of Human DNA Samples in Sequencing and Array-Based Genotype Data'', American journal of human genetics doi:10.1016/j.ajhg.2012.09.004 (volume 91 issue 5 pp.839 - 848)
== For array intensity data ==
== For sequence data ==
[[VerifyIDintensity]] software can estimate sample contamination from Illumina genotype array intensity data.
== Acknowledgements ==
== Acknowledgements ==
VerifyBamID is a result from collaborative effort by Hyun Min Kang, Goo Jun, Matthew Flickinger, Mary Kate Wing, and Goncalo Abecasis. Please email to Hyun Min Kang [[mailto:hmkang@umich.edu| hmkang@umich.edu ]] for any questions.
VerifyBamID is a result from collaborative effort by Hyun Min Kang, Goo Jun, Matthew Flickinger, Mary Kate Wing, and Goncalo Abecasis. Please email to Hyun Min Kang [[mailto:hmkang@umich.edu| hmkang@umich.edu ]] for any questions.
