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Tutorial: GotCloud (view source)

Revision as of 16:29, 4 March 2013

35 bytes removed ,  16:29, 4 March 2013
→‎STEP 6 : Run GotCloud Association Analysis Pipeline
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== STEP 6 : Run GotCloud Association Analysis Pipeline ==  
 
== STEP 6 : Run GotCloud Association Analysis Pipeline ==  
   −
  /net/fantasia/home/hmkang/bin/epacts/bin/epacts single --vcf $GCOUT/vcfs/chr20/chr20.filtered.vcf.gz --ped $GCDATA/test.GBR60.ped --out EPACTS_TEST --test q.linear --run 1 --top 1 --chr 20
+
  TBD/epacts single --vcf $GCOUT/vcfs/chr20/chr20.filtered.vcf.gz --ped $GCDATA/test.GBR60.ped --out $GCOUT/epacts --test q.linear --run 1 --top 1 --chr 20
    
= Tutorial Inputs =  
 
= Tutorial Inputs =  
Retrieved from "http://genome.sph.umich.edu/wiki/Special:MobileDiff/6624"

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