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#* If non-GT field is used, the field is considered as dosage and should be a single numeric value.
#* If non-GT field is used, the field is considered as dosage and should be a single numeric value.
# What are the acceptable input format to encode phenotypes and covariates?
# What are the acceptable input format to encode phenotypes and covariates?
#* See [[#PED file for Phenotypes and Covariates]] for the detailed information
# How should I encode binary phenotypes?
# How should I encode binary phenotypes?
#* If you encode your phenotypes into two different numeric values (e.g. 0/1 or 1/2), EPACTS will automatically recognize them as binary phenotypes and encode them into 1/2 values. Higher value will be considered as cases for case-control association
#* If you encode your phenotypes into two different numeric values (e.g. 0/1 or 1/2), EPACTS will automatically recognize them as binary phenotypes and encode them into 1/2 values. Higher value will be considered as cases for case-control association
