3,045
edits
Changes
From Genome Analysis Wiki
Jump to navigationJump to searchno edit summary
[[GotCloud]] incorporates the alignment and variant calling pipelines into one easy to use tool. GotCloud can run on a user's computer, on an instance in a compute cloud, or can split the work up onto a cluster of machines or instances. This tutorial is just a small test that just runs on the machine the commands are run on.
[[GotCloud]] incorporates the alignment and variant calling pipelines into one easy to use tool. GotCloud can run on a user's computer, on an instance in a compute cloud, or can split the work up onto a cluster of machines or instances. This tutorial is just a small test that just runs on the machine the commands are run on.
GotCloud and this basic tutorial were presented at the [http://ibg.colorado.edu/dokuwiki/doku.php?id=workshop:2013:announcement 2013 IBG Workshop]. It was presented in two sessions. On Wednesday an overview was presented with steps for running the tutorial data: [[Media:IBG2013GotCloud.pdf|IBG2013GotCloud.pdf]]. On Friday more detail on the input files and what goes into generating the input files was presented: [[Media:GotCloudIBGWorkshop2013Friday.pdf|GotCloudIBGWorkshop2013Friday.pdf]].
== STEP 1 : Setup GotCloud ==
== STEP 1 : Setup GotCloud ==
