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=== GWAS catalog variants ===
=== GWAS catalog variants ===
[[File:New lz finemap summary.png|400px]]
[[File:New lz finemap summary.png|400px]]
=== Labeling multiple SNPs ===
You can specify a file controlling the labels for either the reference SNP, or any other arbitrary SNP within the region. For example:
[[File:New lz denote markers.png|700px]]
Use the --denote-markers-file <file> argument to do this:
<syntaxhighlight lang="bash">
locuszoom ... --denote-markers-file <your file>
</syntaxhighlight>
The file looks like:
{|
|-
! scope="col" | snp
! scope="col" | string
! scope="col" | color
|-
| rs231362 || GWAS || blue
|-
| rs163184 || Conditional || purple
|-
|}
It must be tab-delimited and the columns must have a header and be named as such.
== Output ==
== Output ==
