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513 bytes added ,  10:54, 25 March 2010
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*** int minReadLength - The minimum length that a base sequence must be for it to be valid.
 
*** int minReadLength - The minimum length that a base sequence must be for it to be valid.
 
*** int maxReportedErrors - The maximum number of errors that should be reported in detail before suppressing the errors.
 
*** int maxReportedErrors - The maximum number of errors that should be reported in detail before suppressing the errors.
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*'''disableMessages''' : Disables cout messages.  This does not include the Base Composition.  Those are turned on/off based on a parameter to validateFastQFile.
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** Parameters: NONE
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** Return Value: NONE
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*'''disableMessages''' : Enables cout messages.  This does not include the Base Composition.  Those are turned on/off based on a parameter to validateFastQFile.
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** Parameters: NONE
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** Return Value: NONE
 
*'''openFile''' : Open a FastQ File
 
*'''openFile''' : Open a FastQ File
 
** Parameters:
 
** Parameters:
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** Parameters:
 
** Parameters:
 
*** String filename - fastq file to be validated.
 
*** String filename - fastq file to be validated.
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*** bool printBaseComp - whether or not to print the base composition (true = print; false = don't print)
 
*** BaseAsciiMap::SPACE_TYPE spaceType:
 
*** BaseAsciiMap::SPACE_TYPE spaceType:
 
****  BASE_SPACE  - Bases only;
 
****  BASE_SPACE  - Bases only;

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