Changes

From Genome Analysis Wiki
Jump to navigationJump to search
Line 205: Line 205:  
==== PLOTS====
 
==== PLOTS====
   −
'''rareMETAL''' generates QQ plots and manhattan plots from single variant meta-analysis by default. Three QQ plots are generated, one with all variants include, one of variants with maf<0.05 and one with variants maf<0.01. All plots are saved in a pdf file named yourPrefix.meta.plots.pdf.
+
'''rareMETAL''' generates QQ plots and manhattan plots from single variant meta-analysis by default. Three QQ plots are generated, one with all variants include, one of variants with maf<0.05 and one with variants maf<0.01. All plots are saved in a pdf file named yourPrefix.meta.plots.pdf. Genomic controls are also reported in the title of plots.
     
2,004

edits

Navigation menu