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, 22:06, 7 August 2013
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| ==== Association Options==== | | ==== Association Options==== |
| * Currently, CMC type burden test, Madsen-Browning burden test, Variable Threshold burden test and SKAT are provided in '''rareMETAL''', by specifying --burden, --MB, --VT and --SKAT. | | * Currently, CMC type burden test, Madsen-Browning burden test, Variable Threshold burden test and SKAT are provided in '''rareMETAL''', by specifying --burden, --MB, --VT and --SKAT. |
| + | * --maf specifies the minor allele frequency cutoff when doing gene-based or group-based burden tests. The default is maf<0.05. |
| | | |
| ==== Conditional Analysis Options==== | | ==== Conditional Analysis Options==== |