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RAREMETAL Documentation

50 bytes added, 14:01, 8 August 2013
Summary Statistics
=====Summary Statistics=====
Files containing summary statistics and LD matrices generated by '''rareMetalWorker''' should be compressed and [[http://samtools.sourceforge.net/tabix .shtml|tabix]] indexed using the following commands:
bgzip study1.singlevar.score.txt
 
tabix -s 1 -b 2 -e 2 -c "#" study1.singlevar.score.txt.gz
bgzip study1.singlevar.cov.txt
 
tabix -s 1 -b 2 -e 2 -c "#" study1.singlevar.cov.txt.gz
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