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442 bytes added ,  13:57, 10 September 2013
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===Gene-level Association===
 
===Gene-level Association===
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The following command lines let you run gene-level association analysis of trait "LDL" using SKAT, Madsen-Browning weighted burden, rare allele counts un-weighted burden and collapsing burden and variable threshold tests, after inverse normalization of the quantitative trait and adjusting covariates.
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./famRvTest -p your.ped -d your.dat --SKAT --MB --CMC_counts --CMC_binary --VTasymptotic --inverseNormal --useCovariates --traitName LDL
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