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PileupBasedVariantCalling (view source)

Revision as of 15:52, 10 September 2013

2 bytes removed ,  15:52, 10 September 2013
→‎Producing pileups of sequence reads at variant sites
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     capt pileup [options]
 
     capt pileup [options]
 
   
 
   
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     Required Options (Run epacts single -man or see wiki for more info):
+
     Required Options (Run capt-pileup -man or see wiki for more info):
 
       -loci STR        Input genomic position to perform pileup
 
       -loci STR        Input genomic position to perform pileup
 
       -index STR        Index file containing sample IDs and BAM file path
 
       -index STR        Index file containing sample IDs and BAM file path
Retrieved from "http://genome.sph.umich.edu/wiki/Special:MobileDiff/8627"

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