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RAREMETAL

211 bytes removed, 17:52, 16 March 2018
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[[Category:Software]]
[[Category:RAREMETAL]]
'''RAREMETAL''' is a program that facilitates the meta-analysis of rare variants from genotype arrays or sequencing (manuscript in preparation).
It was developed by [[Shuang_Feng|Shuang Feng]], Dajiang Liu and Gonçalo R. Abecasis. Currently, RAREMETAL is being has been used for the analyses in Exomechip blood lipids consortium and [[EMADS|EMADS]].
If you feel the program is useful, please take one minute to tell us your name and email ([https://docs.google.com/spreadsheet/ccc?key=0AuYjznTeEDYudFpqUk9sQ2pkN3d3endjYldqMEp6ZUE&usp=sharing '''registration''']). Thank you!
For questions please contact [[Shuang_Feng|'''Shuang Feng''']] Andy Boughton via email: sfengsph abought at umich dot edu.
== Useful Wiki Pages ==
* The [[RAREMETAL FAQ]]
 
* The [[Summary Files Specification for RAREMETAL]]
* The [[RAREMETALWORKER | RAREMETALWORKER documentation]]
* The [[Rvtests | Rvtests documentation]]
== Download and Build==
To download rareMetal RAREMETAL executable and source code with instruction of build, go to [[Rare-Metal#Download_and_Installation|'''DOWNLOAD and INSTALLATION''']].
== Related Programs ==
[[RAREMETALWORKER]] is a program that does single variant association for sequencing and genotyping array data and generates summary statistics for meta-analysis in RAREMETAL.
 
[[Rvtests]] is a software tool for rare-variant association analysis can also generate output compatible with RAREMETAL.
[[LocusZoom]] is a program that facilitates display of genomewide association scan results.
[[METAL]] is a program that facilitates meta-analysis of single-variant genomewide scans.
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