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== Optional Region Specifying Parameters ==
== Optional Region Specifying Parameters ==
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=== Read only a Specific Reference/Chromosome (<code>--refName</code> or <code>--refID</code>) ===
=== Read only a Specific Reference/Chromosome (<code>--refName</code> or <code>--refID</code>) ===
If you only want to read a specific reference (chromosome), specify either <code>--refName</code> followed by the reference name or </code>--refID</code> followed by the reference id.
If you only want to read a specific reference (chromosome), specify either <code>--refName</code> followed by the reference name or </code>--refID</code> followed by the reference id.
