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Jump to navigationJump to searchTutorial: EMMAX GotCloud STOM (view source)
Revision as of 15:32, 5 January 2014
, 15:32, 5 January 2014→Lecture 2
* Draw QQ plot using the following R commands
* Draw QQ plot using the following R commands
> source('/data/stom2014/session2/r/qqconf.r')�
> source('/data/stom2014/session2/r/qqconf.r')
> T <- read.table('~/out/naive.assoc.linear',header=TRUE)
> T <- read.table('~/out/naive.assoc.linear',header=TRUE)
> pdf('~/out/naive.pdf')
> pdf('~/out/naive.pdf')
> qq.conf.beta(T$P)�> dev.off()
> qq.conf.beta(T$P)
> dev.off()
* Add --adjust option to enable genomic control
* Add --adjust option to enable genomic control
