Changes

From Genome Analysis Wiki
Jump to navigationJump to search
No change in size ,  01:12, 16 January 2014
Line 89: Line 89:  
   myresult/tutorial.example.QT1.raremetal.log
 
   myresult/tutorial.example.QT1.raremetal.log
   −
* To do conditional analysis, we just have to add --condition conditionfile, where conditionfile contains the variant that we want to condition upon in the following format:  
+
* To do conditional analysis, we just have to add --condition conditionfile, where conditionfile contains the variant that we want to condition upon in the following format, then extra columns of conditional analysis results will be saved in the output file "myresult/tutorial.example.QT1.meta.singlevar.results":  
    
   9:505484545:C:T
 
   9:505484545:C:T
   −
Then extra columns of conditional analysis results will be saved in the output file "myresult/tutorial.example.QT1.meta.singlevar.results".
      
* Please refer to the RAREMETAL [[RAREMETAL_Documentation#Gene-level_Tests_Meta-Analysis_Output|'''documentation''']] for detailed description of output format.  
 
* Please refer to the RAREMETAL [[RAREMETAL_Documentation#Gene-level_Tests_Meta-Analysis_Output|'''documentation''']] for detailed description of output format.  
2,004

edits

Navigation menu