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BamUtil

405 bytes added, 16:20, 28 February 2014
Full Release (includes libStatGen)
[[Media:BamUtilLibStatGen.1.0.1011.tar.gz|BamUtilLibStatGen.1.0.1011.tar.gz‎]] - Released 12/228/2014 '''BamUtilLibStatGen.1.0.11 Release Notes'''* Contains: [[LibStatGen Download#Official Releases|libStatGen version 1.0.11]] - see link for version updates* Contains: [[#Release of just BamUtil (does not include libStatGen)|bamUtil version 1.0.11]] - see link for version updates* Now properly supports 'B' & 'f' tags* Cleanup - compile issues
'''BamUtilLibStatGen.1.0.10 Release Notes'''
* Contains: [[LibStatGen Download#Official Releases|libStatGen version 1.0.10]] - see link for version updates
* Contains: [[#Release of just BamUtil (does not include libStatGen)|bamUtil version 1.0.10]] - see link for version updates
* Adds PhoneHome/Version checking.
'''Older Releases'''
*[[Media:BamUtilLibStatGen.1.0.10.tar.gz|BamUtilLibStatGen.1.0.10.tar.gz‎]] - Released 1/2/2014
** Contains: [[LibStatGen Download#Official Releases|libStatGen version 1.0.10]] - see link for version updates
** Contains: [[#Release of just BamUtil (does not include libStatGen)|bamUtil version 1.0.10]] - see link for version updates
** Adds PhoneHome/Version checking.
 
*[[Media:BamUtilLibStatGen.1.0.9.tgz|BamUtilLibStatGen.1.0.9.tgz‎]] - Released 7/7/2013
** Contains: [[LibStatGen Download#Official Releases|libStatGen version 1.0.9]]
**Initial release of bamUtil that includes libStatGen version 1.0.0. It started from the tool found in the deprecated StatGen repository.
**Contains: [[LibStatGen Download#Official Releases|libStatGen version 1.0.0]] [[BamUtil: validate|validate]], [[BamUtil: convert|convert]], [[BamUtil: dumpHeader|dumpHeader]], [[BamUtil: splitChromosome|splitChromosome]], [[BamUtil: writeRegion|writeRegion]], [[BamUtil: dumpRefInfo|dumpRefInfo]], [[BamUtil: dumpIndex|dumpIndex]], [[BamUtil: readIndexedBam|readIndexedBam]], [[BamUtil: filter|filter]], [[BamUtil: readReference|readReference]], [[BamUtil: revert|revert]], [[BamUtil: diff|diff]], [[BamUtil: squeeze|squeeze]], [[BamUtil: findCigars|findCigars]], [[BamUtil: stats|stats]]
 
=== Release of just BamUtil (does not include libStatGen) ===

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