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, 13:39, 1 April 2014
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| The score test statistic, <math>T_i=(U_i^2)/V_{ii}</math>, is asymptotically distributed as chi-squared with one degree of freedom. The score test p-value is reported in RAREMETALWORKER. | | The score test statistic, <math>T_i=(U_i^2)/V_{ii}</math>, is asymptotically distributed as chi-squared with one degree of freedom. The score test p-value is reported in RAREMETALWORKER. |
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− | == Summary Statistics and Covariance Matrices== | + | ===SUMMARY STATISTICS AND COVARIANCE MATRICES=== |
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| RAREMETALWORKER automatically stores the score statistics for each marker ( <math> U_i </math>) together with quality information of that marker, including HWE p-value, call rate, and allele counts. | | RAREMETALWORKER automatically stores the score statistics for each marker ( <math> U_i </math>) together with quality information of that marker, including HWE p-value, call rate, and allele counts. |