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- .../home/mktrost/gotcloudTutorialOut/alignment.recal/HG00096.recal.bam /home/mktrost/gotcloudTutorialOut/tmp/alignment.dedup/HG00096.dedup.bam .../home/mktrost/gotcloudTutorialOut/alignment.recal/HG00100.recal.bam /home/mktrost/gotcloudTutorialOut/tmp/alignment.dedup/HG00100.dedup.bam ...3 KB (299 words) - 14:03, 23 October 2014
- cp -r /home/mktrost/seqshop/inputs/2x/* ~/personal/. perl /home/mktrost/seqshop/inputs/checkIndex.pl ~/personal/align.2x.index ...11 KB (1,960 words) - 18:25, 13 November 2014
- /home/mktrost/bamUtil_1.0.10/bin/bam convert --in myInFile.sam --out myOutFile.bam ...2 KB (329 words) - 20:24, 6 January 2014
- source /net/seqshop-server/home/mktrost/seqshop/setupSS.txt cat /net/seqshop-server/home/mktrost/seqshop/setupSS.txt ...18 KB (2,806 words) - 16:16, 15 December 2014
- PATH_TO_BASE = /home/mktrost/statgen ...1 KB (245 words) - 21:20, 28 March 2011
- source /home/mktrost/seqshop/setup.2x.txt ...3 KB (464 words) - 18:32, 13 November 2014
- export GC=/home/mktrost/seqshop/gotcloud export REF=/home/mktrost/seqshop/reference/all ...10 KB (1,458 words) - 14:23, 2 February 2017
- source /home/mktrost/seqshop/setup.2x.txt ...5 KB (775 words) - 18:30, 13 November 2014
- SS_DIR = /net/seqshop-server/home/mktrost/seqshop/singleSample export EPACTS=/net/seqshop-server/home/mktrost/seqshop/epacts/ ...13 KB (2,110 words) - 16:10, 22 May 2015
- export GC=/net/seqshop-server/home/mktrost/seqshop/gotcloud export REF=/net/seqshop-server/home/mktrost/seqshop/gotcloud/gotcloud.ref ...10 KB (1,511 words) - 14:24, 2 February 2017
- source /net/seqshop-server/home/mktrost/seqshop/setup.txt less /net/seqshop-server/home/mktrost/seqshop/setup.txt ...21 KB (2,694 words) - 14:27, 2 February 2017
- export SSREF=/net/seqshop-server/home/mktrost/seqshop/singleSample/ref ...5 KB (733 words) - 18:57, 21 May 2015
- source /net/seqshop-server/home/mktrost/seqshop/setup.txt less /net/seqshop-server/home/mktrost/seqshop/setup.txt ...19 KB (2,942 words) - 23:12, 30 March 2015
- source /net/seqshop-server/home/mktrost/seqshop/setup.txt less /net/seqshop-server/home/mktrost/seqshop/setup.txt ...21 KB (2,922 words) - 21:09, 17 December 2014
- source /net/seqshop-server/home/mktrost/seqshop/setupSS.txt ...5 KB (821 words) - 16:43, 12 December 2014
- source /net/seqshop-server/home/mktrost/seqshop/setup.txt cat /net/seqshop-server/home/mktrost/seqshop/setup.txt ...17 KB (2,608 words) - 20:35, 15 May 2015
- source /home/mktrost/seqshop/setup.txt less /home/mktrost/seqshop/setup.txt ...17 KB (2,452 words) - 18:37, 13 November 2014
- open and prefetch reference genome /home/mktrost/data/human.g1k.v37.fa: done. ...10 KB (1,546 words) - 18:07, 6 January 2014
- source /home/mktrost/seqshop/setup.txt less /home/mktrost/seqshop/setup.txt ...20 KB (2,959 words) - 18:37, 13 November 2014
- source /home/mktrost/seqshop/setup.txt less /home/mktrost/seqshop/setup.txt ...22 KB (3,052 words) - 18:36, 13 November 2014
