Difference between revisions of "RAREFY COMMAND"
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===--dat=== | ===--dat=== | ||
followed by the file name of your [http://www.sph.umich.edu/csg/abecasis/merlin/tour/input_files.html MERLIN format DAT] file. | followed by the file name of your [http://www.sph.umich.edu/csg/abecasis/merlin/tour/input_files.html MERLIN format DAT] file. | ||
+ | |||
+ | ==Methods== |
Revision as of 19:33, 16 February 2015
Options: Input Files : --ped [], --dat [] Methods : --MCMC, --traitIncreasing, --traitDecreasing Trait : --inverseNormal, --useCovariates, --traitName [] Parameters : --maf [1.0e-03], --effect [1.00] MCMC : --seed, --chains [3], --iterations [50000000] Other : --famList [], --famID [], --cpus [5], --prefix []
Input Files
--ped
followed by the file name of yourMERLIN format PED file.
--dat
followed by the file name of your MERLIN format DAT file.