Difference between revisions of "Abecasis Lab"

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[[Image:AbecasisRetreat2016.jpg|700px|center|Group Photo 2016]]
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<!--[[Image:Abecasis2015Retreat.JPG|400px|center|Group Photo]]-->
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== Mission Statement ==
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We are developing and applying computational and statistical tools to further understanding of complex human diseases, such as cardiovascular disease and diabetes.
 +
 +
== Leadership ==
 +
 +
[[Goncalo Abecasis]] is currently the Felix Moore Collegiate Professor of Biostatistics at the University of Michigan School of Public Health.
 +
 
== Current Members ==
 
== Current Members ==
  
−
=== Research Faculty ===
+
=== Research Fellows ===
  
−
Hyun Min Kang
+
[[File:Kuser.png|50px]] Christian Fuchsberger
  
−
=== Research Fellows ===
+
[[File:Sarah.jpg.jpg|50px]] Sarah Gagliano
  
−
Bingshan Li
+
[[File:PicJingjing.jpg|50px]] Jingjing Yang
  
 
=== Graduate Students ===
 
=== Graduate Students ===
  
−
Wei Chen
+
 
−
Jun Ding
+
[[File:SaiChen.jpg|50px]] Sai Chen
−
Youna Hu
+
 
−
Elizabeth Jewell
+
[[File:Geng.jpg|50px]] Priscilla Geng
−
Yanming Li
+
 
−
Sara Rashkin
+
[[File:HeadOfAlanKwong.jpg|50px]]  [[Alan Kwong]]
−
Matthew Snyder
+
 
−
Xiaowei Zhan
+
[[File:Kuser.png|50px]] Sebanti Sengupta
 +
 
 +
[[File:Headshot.jpg|50px]] Joshua Weinstock
 +
 
 +
[[File:Gregory3.jpg|50px]] Greg Zajac
 +
 
 +
[[File:Fan.jpg|50px]] Fan Zhang
 +
 
 +
[[File:Kuser.png|50px]] Wei Zhou
 +
 
 +
[[File:Xutong.jpg|50px]] Xutong Zhao
  
 
=== Staff ===
 
=== Staff ===
  
−
Paul Anderson
+
[[File:Irene_headshot.jpg|50px]] Irene Felicetti : Administrative Assistant Sr.
−
Laura Baker
+
 
−
Tom Blackwell
+
 
−
Derek Harkness
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[[File:TomBlackwell_crop.jpg|50px]]  [[Tom Blackwell]]  : Research Area Specialist Sr.
 +
 
 +
[[File:Sean_head.jpg|50px]] [[Sean Caron]] : UNIX Systems Administrator
 +
 
 +
[[File:Headshot-chris-clark-2 (3).jpg|50px]] Chris Clark : Applications Programmer/Analyst Sr.
 +
 
 +
[[File:Kuser.png|50px]] Jonathon LeFaive  :  Applications Programmer/Analyst Sr.
 +
 
 +
[[File:Kevin_Web-Profile.jpg ‎|50px]] Kevin Li  : Web Applications Developer
 +
 
 +
[[File:IMG_4735.JPG|50px]] Anita Pandit  :  Research Computer Specialist
 +
 
 +
[[File:Schmidt_small.jpg|50px]] Ellen Schmidt  :  Research Area Specialist Lead
 +
 
 +
[[File:pjvh.jpg|50px]] Peter VandeHaar  :  Applications Programmer/Analyst Sr.
 +
 
 +
[[File:MK_head.jpg|50px]] [[Mary Kate Wing]] : Applications Programmer working on GotCloud Pipelines, C++ library & tools (libStatGen, bamUtils)
  
 
== Alumni ==
 
== Alumni ==
 +
 +
=== Former Research Faculty ===
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* Hyun Min Kang (''graduated in 2011''), now Assistant Professor at the [http://www.sph.umich.edu/biostat/ University of Michigan School of Public Health, Department of Biostatistics].
  
 
=== Former Research Fellows ===
 
=== Former Research Fellows ===
  
−
Weimin Chen (gradudated 2007)
+
* Weimin Chen (graduated 2007), now Associate Professor at the [http://people.virginia.edu/~wc9c/ Department of Public Health Sciences & Center for Public Health Genomics, University of Virginia]
−
Serena Sanna (graduated 2007)
+
 
−
Paul Scheet (graduated 2008)
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* Goo Jun (graduated 2014), now Assistant Professor at the [https://scholar.google.com/citations?user=1wzhcEQAAAAJ&hl=en University of Texas Health Sciences Center]
−
William Stewart (graduated 2008)
+
 
 +
* Bingshan Li (graudated 2011), now Assistant Professor at the [https://medschool.vanderbilt.edu/cqs/people/Bingshan/Li/cqs-faculty-members Center for Quantitative Sciences, Vanderbilt University]
 +
 
 +
* [[Dajiang Liu]] (graduated 2013), now Assistant Professor at the [http://www-personal.umich.edu/~dajiang/ Penn State University College of Medicine]
 +
 
 +
* Serena Sanna (graduated 2007), now an investigator at the [http://www.serenasanna.com/ Istituto di Neurogenetica e Neurofarmacologia in Sardinia, Italy]
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 +
* Paul Scheet (graduated 2008), now Associate Professor at [http://faculty.mdanderson.org/Paul_Scheet/Default.asp?SNID=221605974 Department of Epidemiology, University of Texas MD Anderson Cancer Center]
 +
 
 +
* Carlo Sidore (graduated 2012), now an investigator at the [http://www.cnr.it/istituti/DatiGenerali.html?cds=060 Istituto di Neurogenetica e Neurofarmacologia in Sardinia, Italy]
 +
 
 +
* Fabio Busonero (graduated 2012), now an investigator at the [http://www.cnr.it/istituti/DatiGenerali.html?cds=060 Istituto di Neurogenetica e Neurofarmacologia in Sardinia, Italy]
 +
 
 +
* William Stewart (graduated 2008), now Assistant Professor at [http://www.mathmed.org/#William_Stewart Battelle Center for Computational Medicine, Departments of Statistics and Pediatrics, National Children's Hospital and Ohio State University]
 +
 
 +
* Alex Tsoi (graduated 2014), now Research Assistant Professor at [https://www.med.umich.edu/DERM/faculty/alextsoi_pub.shtml University of Michigan Medical School]
 +
 
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* [[Scott Vrieze]] (graduated 2014), now an Assistant Professor of Psychology and Neuroscience at [http://www.colorado.edu/ibg/people/471 University of Colorado, Boulder]
 +
 
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* [[Lars Fritsche]] (graduated 2016), now an Associate Professor at [http://www.ntnu.edu/ism the Department of Public Health and General Practice at the Norwegian University of Science and Technology] in Trondheim, Norway
  
 
=== Former Doctoral Students ===
 
=== Former Doctoral Students ===
  
−
Yun Li (graduated 2009)
+
* Katharine Brieger, now Graduate Student, Epidemiology, School of Public Health, University of Michigan
−
Mingyao Li (graduated 2005)
+
 
−
Liming Liang (graduated 2009)
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* Wei Chen (graduated 2011), now Assistant Professor at the [http://www.chp.edu/CHP/Chen%2C+Wei%2C+PhD Department of Pediatrics, University of Pittsburgh Medical Center]
−
Tasha Fingerlin (graduate 2005)
+
 
−
Andrew Skol (graduated 2006)
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* Jun Ding (graduated 2010), now Staff Scientist / Facility Head at the [http://www.grc.nia.nih.gov/branches/lg/lg.htm Laboratory of Genetics, National Institute on Aging (NIH)].
 +
 
 +
* Shuang Feng (graduated 2015), now Senior Data Scientist at Uber.
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* Weihua Guan (graduated 2010), now Assistant Professor at the [http://sph.umn.edu/faculty1/expertise/statistical-genetics/name/weihua-guan/ Department of Biostatistics, University of Minnesota School of Public Health].
 +
 
 +
* Yun Li (graduated 2009), now Assistant Professor at the [http://www.sph.unc.edu/?option=com_profiles&Itemid=6138&profileAction=ProfDetail&pid=708777879 Department of Biostatistics, University of North Carolina].
 +
 
 +
* Youna Hu (graduated 2012), now a Data Sciences Engineer at A9, a subsidiary of 23andMe, Inc.
 +
 
 +
* Mingyao Li (graduated 2005), now Associate Professor at the [http://www.cceb.upenn.edu/faculty/index.php?id=159 Department of Biostatistics and Epidemiology, University of Pennsylvania]
 +
 
 +
* Liming Liang (graduated 2009), now Associate Professor at the [http://www.hsph.harvard.edu/faculty/liming-liang/ Departments of Biostatistics and Epidemiology, Harvard University]
 +
 
 +
* Tasha Fingerlin (graduated 2003), now Associate Professor at the [http://www.ucdenver.edu/academics/colleges/PublicHealth/departments/Epidemiology/About/Faculty/Pages/FingerlinT.aspx Section of Epidemiology and Community Health, University of Colorado Health Sciences Center]
 +
 
 +
* Sara Rashkin (graduated 2015), now Post Doc at [http://wittelab.ucsf.edu/pages/people UCSF Witte Lab]
 +
 
 +
* Andrew Skol (graduated 2006), now Assistant Professor at the [http://med-www02.bsd.uchicago.edu/339/FacultyPro/faculty_profile.aspx?empl_id=10164 Section of Genetic Medicine, University of Chicago]
 +
 
 +
* [[Xiaowei Zhan]] (graduated 2014), now Assistant Professor at the [http://profiles.utsouthwestern.edu/profile/152189/xiaowei-zhan.html Department of Clinical Science, University of Texas - Southwestern Medical Center].
 +
 
 +
* Jin Zheng (graduated 2009), now working in the Pharmaceutical Industry at Eli Lilly.
  
 
=== Former Masters Students ===
 
=== Former Masters Students ===
  
−
Xijing Han
+
* Su Chu
−
Heather Munro
+
 
−
Theresa Scott (nee Daigneault)
+
* Nate Cohen
−
Abigail Woodroffe
+
 
−
Zaojun Ye
+
* Melinda Curran
−
Matthew Zawitowski
+
 
−
Anita Yu Zhao
+
* Vesela Gateva
 +
 
 +
* Xijing Han
 +
 
 +
* Dan Hovelson
 +
 
 +
* Elizabeth Jewell
 +
 
 +
* Michelle Kleckner
 +
 
 +
* Ben Lerch
 +
 
 +
* Yanming Li
 +
 
 +
* Heather Munro
 +
 
 +
* Nick Seewald
 +
 
 +
* Theresa Scott (nee Daigneault)
 +
 
 +
* Matthew Snyder
 +
 
 +
* Vivian Wang
 +
 
 +
* Yuan Wei
 +
 
 +
* Abigail Woodroffe
 +
 
 +
* Zaojun Ye
 +
 
 +
* Matthew Zawitowski
 +
 
 +
* Anita Yu Zhao
 +
 
 +
* Wanlin Zheng
 +
 
 +
* Tingting Zhou
 +
 
 +
=== Former Staff ===
 +
 
 +
* Paul Anderson
 +
 
 +
* Laura Baker
 +
 
 +
* [[Jennifer Bragg-Gresham]]
 +
 
 +
* Johanna Forster
 +
 
 +
* Jan Wigginton
  
 
=== Visitors ===
 
=== Visitors ===
  
−
Toshiko Tanakato
+
* Qing Lu
 +
 
 +
* Andrea Maschio
 +
 
 +
* Giorgio Pistis
 +
 
 +
* Eleanora Porcu
 +
 
 +
* Toshiko Tanakato
 +
 
 +
== Really Useful Stuff ==
 +
 
 +
* [[Abecasis Group Awards]]
 +
* [https://calendars.office.microsoft.com/pubcalstorage/m3n2kr0z1470909/Goncalo_Abecasis_Calendar(1).ics Goncalo's Calendar]

Latest revision as of 17:03, 23 March 2023

Group Photo 2016


Mission Statement

We are developing and applying computational and statistical tools to further understanding of complex human diseases, such as cardiovascular disease and diabetes.

Leadership

Goncalo Abecasis is currently the Felix Moore Collegiate Professor of Biostatistics at the University of Michigan School of Public Health.

Current Members

Research Fellows

Kuser.png Christian Fuchsberger

Sarah.jpg.jpg Sarah Gagliano

PicJingjing.jpg Jingjing Yang

Graduate Students

SaiChen.jpg Sai Chen

Geng.jpg Priscilla Geng

HeadOfAlanKwong.jpg Alan Kwong

Kuser.png Sebanti Sengupta

Headshot.jpg Joshua Weinstock

Gregory3.jpg Greg Zajac

Fan.jpg Fan Zhang

Kuser.png Wei Zhou

Xutong.jpg Xutong Zhao

Staff

Irene headshot.jpg Irene Felicetti : Administrative Assistant Sr.


TomBlackwell crop.jpg Tom Blackwell : Research Area Specialist Sr.

Sean head.jpg Sean Caron : UNIX Systems Administrator

Headshot-chris-clark-2 (3).jpg Chris Clark : Applications Programmer/Analyst Sr.

Kuser.png Jonathon LeFaive : Applications Programmer/Analyst Sr.

Kevin Web-Profile.jpg Kevin Li : Web Applications Developer

IMG 4735.JPG Anita Pandit : Research Computer Specialist

Schmidt small.jpg Ellen Schmidt : Research Area Specialist Lead

Pjvh.jpg Peter VandeHaar : Applications Programmer/Analyst Sr.

MK head.jpg Mary Kate Wing : Applications Programmer working on GotCloud Pipelines, C++ library & tools (libStatGen, bamUtils)

Alumni

Former Research Faculty

Former Research Fellows

Former Doctoral Students

  • Katharine Brieger, now Graduate Student, Epidemiology, School of Public Health, University of Michigan
  • Shuang Feng (graduated 2015), now Senior Data Scientist at Uber.
  • Youna Hu (graduated 2012), now a Data Sciences Engineer at A9, a subsidiary of 23andMe, Inc.
  • Jin Zheng (graduated 2009), now working in the Pharmaceutical Industry at Eli Lilly.

Former Masters Students

  • Su Chu
  • Nate Cohen
  • Melinda Curran
  • Vesela Gateva
  • Xijing Han
  • Dan Hovelson
  • Elizabeth Jewell
  • Michelle Kleckner
  • Ben Lerch
  • Yanming Li
  • Heather Munro
  • Nick Seewald
  • Theresa Scott (nee Daigneault)
  • Matthew Snyder
  • Vivian Wang
  • Yuan Wei
  • Abigail Woodroffe
  • Zaojun Ye
  • Matthew Zawitowski
  • Anita Yu Zhao
  • Wanlin Zheng
  • Tingting Zhou

Former Staff

  • Paul Anderson
  • Laura Baker
  • Johanna Forster
  • Jan Wigginton

Visitors

  • Qing Lu
  • Andrea Maschio
  • Giorgio Pistis
  • Eleanora Porcu
  • Toshiko Tanakato

Really Useful Stuff

Retrieved from "http://genome.sph.umich.edu/w/index.php?title=Abecasis_Lab&oldid=16418"