From Genome Analysis Wiki
Jump to navigationJump to search
777 bytes added
, 08:26, 29 October 2012
Line 12: |
Line 12: |
| You'll need to know some details when launching an instance: | | You'll need to know some details when launching an instance: |
| | | |
− | * What to launch | + | * '''What Instance''' to launch. You have several choices |
− | ** Our Pipeline Instance - we have prepared a version of the ''Ubuntu Server 12.04.1 LTS'' | + | ** ami-be59d78e which is an instance we have prepared based on ''Ubuntu Server 12.04.1 LTS''. |
− | instance that has all of our software installed.
| + | It has all of our software installed. |
− | * Instance size (memory and number of processors) | + | ** Some other instance. The instance must run 64 bit software and is either Ubuntu of any version or Redhat/CentOS 6.3. |
| + | You will also need to install the Pipeline software which will require about 15 minutes. |
| + | |
| + | * '''Instance size''' (memory and number of processors). The pipeline software will require at least 8GB |
| + | of memory (type m1.large) and can use as many processors as is available. |
| + | |
| + | * '''Storage''' is perhaps the most difficult detail as it is controlled completely by the size of your data. |
| + | As a generate rule you will need three times the space required for your sequence data. |
| + | For instance in the 1000 Genomes data, the data for one individual takes about 45G. |
| + | If you have 1000 Genome data for nine individuals, you'll need about 1500GB of space |
| + | (9x450x3 plus a little extra space). |
| + | |
| | | |
| | | |