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595 bytes added
, 08:45, 29 October 2012
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− | Prepare Your Instance | + | '''Prepare Your Instance''' |
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| If you launched some other instance than the one prepared for our software, you will need to install | | If you launched some other instance than the one prepared for our software, you will need to install |
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| If you have 1000 Genome data for nine individuals, you'll need about 1500GB of space (9x450x3 plus a little extra space). | | If you have 1000 Genome data for nine individuals, you'll need about 1500GB of space (9x450x3 plus a little extra space). |
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− | Making your data available for the Pipeline can be accomplished in many way. | + | Making your data available for the Pipeline can be accomplished in many ways. |
| Here is a simple straightforward organization you might want to use. | | Here is a simple straightforward organization you might want to use. |
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| + | * Using the AWS EC2 Console Dashboard create one EBS volume (ELASTIC BLOCK STORE -> Volumes) for the sequence data (e.g. 500GB). |
| + | * Using the Dashboard create another EBS volume for the output of the aligner step (e.g. another 500GB). |
| + | * Using the Dashboard create another EBS volume for the output of the umake step (e.g. another 500GB). |
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| + | Configure these EBS volumes so they use separate devices devices g, g and h (e.g. /dev/sdf (probably /dev/xvdf), |
| + | /dev/sdg (probably /dev/xvdg) and /dev/sdh (probably /dev/xvdh)). |
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− | | + | Launch your instance and login as explained in the AWS documentation. |
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