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Arf (view source)

Revision as of 15:47, 27 January 2012

189 bytes removed ,  15:47, 27 January 2012
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   #-l option defines the length in which to differentiate INDELs and SVs
 
   #-l option defines the length in which to differentiate INDELs and SVs
 
   arf -a vartype 1000g.vcf -l 30
 
   arf -a vartype 1000g.vcf -l 30
−
  −
  #extracts GT fields from 1000g.vcf for the variants found in paltum.sit.vcf
  −
  #-d specifies a data processing action
  −
  arf -d extract 1000g.chr1.vcf 1000g.ch2.vcf -f paltum.site.vcf
      
== Command Line Options ==
 
== Command Line Options ==
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