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<div style="font-size:162%; border:none; margin:0; padding:.1em; color:#000;">This tool has been DEPRECATED, and replaced by [[VerifyBamID]]</div>
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'''bamGenotypeCheck''' is a program that verifies whether the reads in particular file match previously known genotypes for an individual (or group of individuals).
'''bamGenotypeCheck''' is a program that verifies whether the reads in particular file match previously known genotypes for an individual (or group of individuals).
== Download bamGenotypeCheck ==
To get a copy go to the [http://csg.sph.umich.edu//pha/karma/download/ Karma Download] download page.
== Build bamGenotypeCheck ==
Karma (which includes bamGenotypeCheck) is designed to be reasonably portable.
However, since development occurs only on Ubuntu 9.10 x86 and x64 platforms, and later, there are likely other portability issues.
We support Karma only on Ubuntu 9.10 and later on 64-bit processors.
== Usage ==
== Usage ==
