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=== Input Files ===
=== Input Files ===
-r ''FASTA format genome reference''
-r ''genome reference in [[http://en.wikipedia.org/wiki/Fasta_format|simplified FASTA format]]''
-a ''allele Frequency file in [[MERLIN format]]''
-a ''allele Frequency file in [[MERLIN format]]''
-p ''pedigree file in [[MERLIN format]]''
-p ''pedigree file in [[MERLIN format]]''
