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Biostatistics 615/815: Main Page (view source)

Revision as of 21:53, 18 December 2012

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→‎Class Notes
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== Class Notes ==
 
== Class Notes ==
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* Lecture 1 : Introduction to Statistical Computing -- [[Media:bios615-fa12-lec01-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec01-presentation.pdf | (Presentation PDF)]]
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* Lecture 1 : Introduction to Statistical Computing -- [[Media:bios615-fa12-lec01-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec01-presentation.pdf | (Presentation PDF)]] (revised 9/10)
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* Lecture 2 : Introduction to C++ Programming -- [[Media:bios615-fa12-lec02-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec02-presentation.pdf | (Presentation PDF)]]
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* Lecture 2 : Introduction to C++ Programming -- [[Media:bios615-fa12-lec02-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec02-presentation.pdf | (Presentation PDF)]] (revised 9/10)
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* Lecture 3 : C++ Basics and Fishers Exact Test -- [[Media:bios615-fa12-lec03-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec03-presentation.pdf | (Presentation PDF)]]
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* Lecture 3 : C++ Basics and Fishers Exact Test -- [[Media:bios615-fa12-lec03-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec03-presentation.pdf | (Presentation PDF)]] (revised 9/18)
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* Lecture 4 : STLs and Divide & Conquer Algorithms -- [[Media:bios615-fa12-lec04-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec04-presentation.pdf | (Presentation PDF)]] (uploaded 9/12)
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* Lecture 5 : Merge Sort, Quicksort, and arrays -- [[Media:bios615-fa12-lec05-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec05-presentation.pdf | (Presentation PDF)]] (revised 9/20)
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* Lecture 6 : Elementary Data Structures -- [[Media:bios615-fa12-lec06-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec06-presentation.pdf | (Presentation PDF)]] (revised 9/24)
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* Lecture 7 : Elementary Data Structures -- [[Media:bios615-fa12-lec07-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec07-presentation.pdf | (Presentation PDF)]] (revised 10/9)
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* Lecture 8 : Dynamic Programming -- [[Media:bios615-fa12-lec08-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec08-presentation.pdf | (Presentation PDF)]] (revised 10/3)
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* Lecture 9 : Dynamic Programming & Hidden Markov Models -- [[Media:bios615-fa12-lec09-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec09-presentation.pdf | (Presentation PDF)]] (revised 10/3)
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* Lecture 10 : Hidden Markov Models -- [[Media:bios615-fa12-lec10-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec10-presentation.pdf | (Presentation PDF)]] (uploaded 10/3)
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* Lecture 11 : Hidden Markov Models, STLs, and Boost Library -- [[Media:bios615-fa12-lec11-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec11-presentation.pdf | (Presentation PDF)]] (revised 10/17)
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* Lecture 12 : Interfacing R and C++ -- [[Media:bios615-fa12-lec12-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec12-presentation.pdf | (Presentation PDF)]] (revised 10/17)
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* Lecture 13 : R packages and Matrix Library -- [[Media:bios615-fa12-lec13-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec13-presentation.pdf | (Presentation PDF)]] (revised 10/30)
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* Lecture 14 : Matrix Computation -- [[Media:bios615-fa12-lec14-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec14-presentation.pdf | (Presentation PDF)]] (revised 10/30)
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* Lecture 15 : Random Numbers & Monte Carlo Methods -- [[Media:bios615-fa12-lec15-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec15-presentation.pdf | (Presentation PDF)]] (revised 10/31)
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* Lecture 16 : Importance Sampling & Root Finding -- [[Media:bios615-fa12-lec16-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec16-presentation.pdf | (Presentation PDF)]] (uploaded 10/31)
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* Lecture 17 : Single Dimensional Optimization -- [[Media:bios615-fa12-lec17-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec17-presentation.pdf | (Presentation PDF)]] (uploaded 11/13)
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* Lecture 18 : Multi-Dimensional Optimization -- [[Media:bios615-fa12-lec18-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec18-presentation.pdf | (Presentation PDF)]] (revised 12/6)
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* Lecture 19 : E-M Algorithm -- [[Media:bios615-fa12-lec19-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec19-presentation.pdf | (Presentation PDF)]] (revised 12/6)
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* Lecture 20 : Simulated Annealing -- [[Media:bios615-fa12-lec20-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec20-presentation.pdf | (Presentation PDF)]] (revised 12/9)
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* Lecture 21 : Gibbs Sampling -- [[Media:bios615-fa12-lec21-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec21-presentation.pdf | (Presentation PDF)]] (revised 12/6)
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* Lecture 22 : Advanced Hidden Markov Models -- [[Media:bios615-fa12-lec22-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec22-presentation.pdf | (Presentation PDF)]] (revised 12/18)
    
== Problem Sets ==
 
== Problem Sets ==
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* Problem Set 0 (Due September 10) : [[Media:bios615-fa12-hw0.pdf | (PDF)]]
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* Problem Set 0 (Due September 10) : [[Media:bios615-fa12-hw0.pdf | (PDF)]] (revised on 9/12)
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* Problem Set 1 (Due September 20) : [[Media:bios615-fa12-hw1.pdf | (PDF)]]
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* Problem Set 1 (Due September 22) : [[Media:bios615-fa12-hw1.pdf | (PDF)]] (revised on 9/18)
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* Problem Set 2 (Due October 6) : [[Media:bios615-fa12-hw2.pdf | (PDF)]]
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* Problem Set 3 (Due October 20) : [[Media:bios615-fa12-hw3.pdf | (PDF)]] (corrected on 10/17)
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* Problem Set 4 (Due November 10) : [[Media:bios615-fa12-hw4.pdf | (PDF)]] (uploaded on 10/30)
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* Problem Set 5 (Due December 1) : [[Media:bios615-fa12-hw5.pdf | (PDF)]] (uploaded on 11/17)
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* Problem Set 6 (Due December 19) : [[Media:bios615-fa12-hw6.pdf | (PDF)]] (revised on 12/18)
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== Exams ==
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* Midterm on 10/23 : [[Media:bios615-fa12-midterm.pdf | (PDF)]]
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== 815 Term Project ==
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See [[Biostatistics_815_Term_Project]] for detailed information
    
== Office Hours ==
 
== Office Hours ==
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== Standards of Academic Conduct ==
 
== Standards of Academic Conduct ==
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* See "Assingment" section in Lecture 01 for details of honor code.
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* See "Assignment" section in Lecture 01 for details of honor code.
 
* The following is an extract from the School of Public Health's Student Code of Conduct [http://www.sph.umich.edu/academics/policies/conduct.html]:
 
* The following is an extract from the School of Public Health's Student Code of Conduct [http://www.sph.umich.edu/academics/policies/conduct.html]:
 
''Student academic misconduct includes behavior involving plagiarism, cheating, fabrication, falsification of records or official documents, intentional misuse of equipment or materials, and aiding and abetting the perpetration of such acts. The preparation of reports, papers, and examinations, assigned on an individual basis, must represent each student’s own effort. Reference sources should be indicated clearly. The use of assistance from other students or aids of any kind during a written examination, except when the use of books or notes has been approved by an instructor, is a violation of the standard of academic conduct.''
 
''Student academic misconduct includes behavior involving plagiarism, cheating, fabrication, falsification of records or official documents, intentional misuse of equipment or materials, and aiding and abetting the perpetration of such acts. The preparation of reports, papers, and examinations, assigned on an individual basis, must represent each student’s own effort. Reference sources should be indicated clearly. The use of assistance from other students or aids of any kind during a written examination, except when the use of books or notes has been approved by an instructor, is a violation of the standard of academic conduct.''
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