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Revision as of 21:53, 18 December 2012
, 21:53, 18 December 2012→Class Notes
* Lecture 4 : STLs and Divide & Conquer Algorithms -- [[Media:bios615-fa12-lec04-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec04-presentation.pdf | (Presentation PDF)]] (uploaded 9/12)
* Lecture 4 : STLs and Divide & Conquer Algorithms -- [[Media:bios615-fa12-lec04-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec04-presentation.pdf | (Presentation PDF)]] (uploaded 9/12)
* Lecture 5 : Merge Sort, Quicksort, and arrays -- [[Media:bios615-fa12-lec05-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec05-presentation.pdf | (Presentation PDF)]] (revised 9/20)
* Lecture 5 : Merge Sort, Quicksort, and arrays -- [[Media:bios615-fa12-lec05-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec05-presentation.pdf | (Presentation PDF)]] (revised 9/20)
* Lecture 6 : Elementary Data Structures -- [[Media:bios615-fa12-lec06-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec06-presentation.pdf | (Presentation PDF)]] (uploaded 9/20)
* Lecture 6 : Elementary Data Structures -- [[Media:bios615-fa12-lec06-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec06-presentation.pdf | (Presentation PDF)]] (revised 9/24)
* Lecture 7 : Elementary Data Structures -- [[Media:bios615-fa12-lec07-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec07-presentation.pdf | (Presentation PDF)]] (revised 10/9)
* Lecture 8 : Dynamic Programming -- [[Media:bios615-fa12-lec08-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec08-presentation.pdf | (Presentation PDF)]] (revised 10/3)
* Lecture 9 : Dynamic Programming & Hidden Markov Models -- [[Media:bios615-fa12-lec09-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec09-presentation.pdf | (Presentation PDF)]] (revised 10/3)
* Lecture 10 : Hidden Markov Models -- [[Media:bios615-fa12-lec10-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec10-presentation.pdf | (Presentation PDF)]] (uploaded 10/3)
* Lecture 11 : Hidden Markov Models, STLs, and Boost Library -- [[Media:bios615-fa12-lec11-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec11-presentation.pdf | (Presentation PDF)]] (revised 10/17)
* Lecture 12 : Interfacing R and C++ -- [[Media:bios615-fa12-lec12-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec12-presentation.pdf | (Presentation PDF)]] (revised 10/17)
* Lecture 13 : R packages and Matrix Library -- [[Media:bios615-fa12-lec13-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec13-presentation.pdf | (Presentation PDF)]] (revised 10/30)
* Lecture 14 : Matrix Computation -- [[Media:bios615-fa12-lec14-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec14-presentation.pdf | (Presentation PDF)]] (revised 10/30)
* Lecture 15 : Random Numbers & Monte Carlo Methods -- [[Media:bios615-fa12-lec15-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec15-presentation.pdf | (Presentation PDF)]] (revised 10/31)
* Lecture 16 : Importance Sampling & Root Finding -- [[Media:bios615-fa12-lec16-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec16-presentation.pdf | (Presentation PDF)]] (uploaded 10/31)
* Lecture 17 : Single Dimensional Optimization -- [[Media:bios615-fa12-lec17-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec17-presentation.pdf | (Presentation PDF)]] (uploaded 11/13)
* Lecture 18 : Multi-Dimensional Optimization -- [[Media:bios615-fa12-lec18-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec18-presentation.pdf | (Presentation PDF)]] (revised 12/6)
* Lecture 19 : E-M Algorithm -- [[Media:bios615-fa12-lec19-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec19-presentation.pdf | (Presentation PDF)]] (revised 12/6)
* Lecture 20 : Simulated Annealing -- [[Media:bios615-fa12-lec20-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec20-presentation.pdf | (Presentation PDF)]] (revised 12/9)
* Lecture 21 : Gibbs Sampling -- [[Media:bios615-fa12-lec21-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec21-presentation.pdf | (Presentation PDF)]] (revised 12/6)
* Lecture 22 : Advanced Hidden Markov Models -- [[Media:bios615-fa12-lec22-handout.pdf | (Handout PDF)]] [[Media:bios615-fa12-lec22-presentation.pdf | (Presentation PDF)]] (revised 12/18)
== Problem Sets ==
== Problem Sets ==
* Problem Set 0 (Due September 10) : [[Media:bios615-fa12-hw0.pdf | (PDF)]] (revised on 9/12)
* Problem Set 0 (Due September 10) : [[Media:bios615-fa12-hw0.pdf | (PDF)]] (revised on 9/12)
* Problem Set 1 (Due September 22) : [[Media:bios615-fa12-hw1.pdf | (PDF)]] (revised on 9/18)
* Problem Set 1 (Due September 22) : [[Media:bios615-fa12-hw1.pdf | (PDF)]] (revised on 9/18)
* Problem Set 2 (Due October 6) : [[Media:bios615-fa12-hw2.pdf | (PDF)]]
* Problem Set 3 (Due October 20) : [[Media:bios615-fa12-hw3.pdf | (PDF)]] (corrected on 10/17)
* Problem Set 4 (Due November 10) : [[Media:bios615-fa12-hw4.pdf | (PDF)]] (uploaded on 10/30)
* Problem Set 5 (Due December 1) : [[Media:bios615-fa12-hw5.pdf | (PDF)]] (uploaded on 11/17)
* Problem Set 6 (Due December 19) : [[Media:bios615-fa12-hw6.pdf | (PDF)]] (revised on 12/18)
== Exams ==
* Midterm on 10/23 : [[Media:bios615-fa12-midterm.pdf | (PDF)]]
== 815 Term Project ==
See [[Biostatistics_815_Term_Project]] for detailed information
== Office Hours ==
== Office Hours ==
