From Genome Analysis Wiki
Jump to navigationJump to search
430 bytes added
, 13:53, 28 October 2013
Line 68: |
Line 68: |
| | | |
| [[830 - BasicMapper::main()]] | | [[830 - BasicMapper::main()]] |
| + | |
| + | [[830 - MaqIndex::GetWord()]] |
| + | |
| + | [[830 - MaqIndex::BuildIndex()]] |
| + | |
| + | [[830 - MaqIndex::LookupWord()]] |
| + | |
| + | [[830 - MaqIndex::CompareToIndex()]] |
| + | |
| + | [[830 - BestAlignment::MaqAlignment()]] |
| + | |
| + | [[830 - BestAlignment::EvaluateAlignment() (main loop)]] |
| + | |
| + | [[830 - BestAlignment::EvaluateAlignment() (detailed comparison)]] |
| + | |
| + | [[830 - BestAlignment::isNewPosition()]] |
| + | |
| + | [[830 - BestAlignment::IterateCache()]] |
| + | |
| + | [[830 - BestAlignment::ClearPositions()]] |