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| <code>bool FastQFile::isEof()</code>
| <code>bool FastQFile::isEof()</code>
| Returns true if it is the end of the file, false if not.
| Returns true if it is the end of the file, false if not.
|-
| <code>bool FastQFile::keepReadingFile()</code>
| Returns true if the file should continue to be read. Returns false on EOF or on a read error (corrupt gzip files never indicate EOF).
This method should be used for loops that continually read sequences instead of FastQFile::isEof()
|-
|-
| <code>FastQStatus FastQFile::validateFastQFile(const String &filename, bool printBaseComp, BaseAsciiMap::SPACE_TYPE spaceType)</code>
| <code>FastQStatus FastQFile::validateFastQFile(const String &filename, bool printBaseComp, BaseAsciiMap::SPACE_TYPE spaceType)</code>
}
}
// Keep reading the file until there are no more fastq sequences to process.
// Keep reading the file until there are no more fastq sequences to process.
while (!fastQFile.isEof())
while (fastQFile.keepReadingFile())
{
{
// Read one sequence. This call will read all the lines for
// Read one sequence. This call will read all the lines for
