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Revision as of 16:35, 13 April 2010
, 16:35, 13 April 2010→Example
return 0;
return 0;
}
}
// Estimate allele frequencies for all markers
ped.EstimateAlleleFrequencies();
// Get some genotype statistics for the first marker
// Get some genotype statistics for the first marker
printf("Statistics for marker %s\n", (const char *) ped.markerNames[0]);
printf("Statistics for marker %s\n", (const char *) ped.markerNames[0]);
// Get information on the first marker
MarkerInfo * info = ped.GetMarkerInfo(0);
// Get information on marker rs12345
MarkerInfo * rs12345 = ped.GetMarkerInfo("rs12345");
// Number of alleles for the first marker
int alleleCount = info.GetAlleleCount();
// Frequency of the first allele
int freq1 = info.freq[1];
// Name of the first allele, typically "A", "C", "G" or "T" for SNPs
String label = info.GetAlleleLabel(1);
}
}
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