From Genome Analysis Wiki
Jump to navigationJump to search
6 bytes removed
, 11:05, 2 February 2017
Line 9: |
Line 9: |
| | | |
| === Sam Header Basics === | | === Sam Header Basics === |
− | The SamFileHeader is comprised of multiple [http://www.sph.umich.edu/csg/mktrost/doxygen/current/classSamHeaderRecord.html SamHeaderRecords]. | + | The SamFileHeader is comprised of multiple [http://csg.sph.umich.edu//mktrost/doxygen/current/classSamHeaderRecord.html SamHeaderRecords]. |
| | | |
| There are 4 types of SAM Header Records: | | There are 4 types of SAM Header Records: |
Line 23: |
Line 23: |
| The '''SamFileHeader''' also contains Comments, type CO. They are not included as part of the '''SamHeaderRecord''' class since they do not contain Tag/Value pairs. | | The '''SamFileHeader''' also contains Comments, type CO. They are not included as part of the '''SamHeaderRecord''' class since they do not contain Tag/Value pairs. |
| | | |
− | See: http://www.sph.umich.edu/csg/mktrost/doxygen/current/classSamFileHeader.html for documentation. | + | See: http://csg.sph.umich.edu//mktrost/doxygen/current/classSamFileHeader.html for documentation. |
| | | |
| ==== Additional Proposed Accessors ==== | | ==== Additional Proposed Accessors ==== |