Changes

<source lang="bash">

<source lang="bash">

mach1 -d chr1.dat -p chr1.ped --rounds 20 --states 200 --phase --interim 5 --sample 5

mach1 -d chr1.dat -p chr1.ped --rounds 20 --states 200 --phase --interim 5 --sample 5 --prefix chr1

minimac --refHaps ref.hap.$chr.gz --refSnps ref.snps.$chr.gz --haps target.hap.$chr.gz --snps target.snps.$chr.gz --rounds 5 --states 200 --prefix results

minimac --refHaps 1000genomes.chr1.hap.gz --refSnps 1000genomes.chr1.snps --haps chr1.hap.gz --snps chr1.snps --rounds 5 --states 200 --prefix imputation-results

</source>

</source>

== Download ==

== Download ==