Changes

From Genome Analysis Wiki
Jump to navigationJump to search
no edit summary
Line 21: Line 21:  
Be sure the zone is the same as the one for the instance you just launched/created.
 
Be sure the zone is the same as the one for the instance you just launched/created.
 
The volume should be based on 'No Snapshot'.
 
The volume should be based on 'No Snapshot'.
Once it is created, attach it to the  instance you have launched and mount it it /gotcloud
+
Once it is created, attach it to the  instance you have launched and '''mount it it /gotcloud'''.
    
'''Install the Software'''
 
'''Install the Software'''
Line 27: Line 27:  
Follow the instructions to install a Debian package  [[Pipeline Debian Package|debian package]]
 
Follow the instructions to install a Debian package  [[Pipeline Debian Package|debian package]]
 
Run the tests to be sure everything is OK.
 
Run the tests to be sure everything is OK.
 +
This installs files in /usr/local/gotcloud and these need to be copied to the snapshot disk.
 +
 +
<code>
 +
  cd /gotcloud
 +
  rm -rf bin scripts test      # Remove old GotCloud
 +
  sudo rsync -av /usr/local/gotcloud/* /gotcloud
 +
</code>
    
Even though the references are not part of the distribution, you cannot do anything useful
 
Even though the references are not part of the distribution, you cannot do anything useful
Line 36: Line 43:  
   cd /gotcloud
 
   cd /gotcloud
 
   sudo tar xzf /mnt/hs37-db132.tar.gz
 
   sudo tar xzf /mnt/hs37-db132.tar.gz
   sudo chown -R ubuntu.ubuntu ref
+
   sudo chown -R ubuntu.ubuntu gotcloud.ref
   sudo chmod 0755 ref
+
   sudo chmod 0755 gotcloud.ref
   chmod 0644 ref/*
+
   chmod 0644 gotcloud.ref/*
 
   ls -la ref
 
   ls -la ref
 
   sudo rm -f /mnt/hs37-db132.tar.gz    # if no error
 
   sudo rm -f /mnt/hs37-db132.tar.gz    # if no error
283

edits

Navigation menu