1,120
edits
Changes
From Genome Analysis Wiki
Jump to navigationJump to search→Effect allele
Q. Which allele is effect allele?
Q. Which allele is effect allele?
A. EMMAX simply follows the encoding scheme of .tped file in additive model. So whichever allele encoded as 1 in the .tped file, it will be the effect allele (usually the major allele)
A. EMMAX simply follows the encoding scheme of .tped file in additive model. So whichever allele encoded as 2 in the .tped file, it will be the effect allele (usually the major allele)
=== Support for VCF format and Gene-level Burden Test ===
=== Support for VCF format and Gene-level Burden Test ===
