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, 08:15, 23 July 2014
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| Q. Which allele is effect allele? | | Q. Which allele is effect allele? |
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− | A. EMMAX simply follows the encoding scheme of .tped file in additive model. So whichever allele encoded as 1 in the .tped file, it will be the effect allele (usually the major allele) | + | A. EMMAX simply follows the encoding scheme of .tped file in additive model. So whichever allele encoded as 2 in the .tped file, it will be the effect allele (usually the major allele) |
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| === Support for VCF format and Gene-level Burden Test === | | === Support for VCF format and Gene-level Burden Test === |