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=== D. Typical DIAGRAM analysis using existing association pipeline (with BMI)<br> ===
=== D. Typical DIAGRAM analysis using existing association pipeline (with BMI)<br> ===
This is the typical DIAGRAM analysis using your current association pipeline and software including BMI adjustment. [[Image:1000Genomes march2012 imputation analysis plan 08312012.pdf]]
This is the typical DIAGRAM analysis using your current association pipeline and software including BMI adjustment.
'''Alternative: Analyze VCF and PED files using the Wald test with the EPACTS software:'''
'''Alternative: Analyze VCF and PED files using the Wald test with the EPACTS software:'''
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=== E. Analysis of low frequency variants using Firth bias-corrected logistic regression (with BMI) ===
=== E. Analysis of low frequency variants using Firth bias-corrected logistic regression (with BMI) ===
