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This is the typical DIAGRAM analysis using your current association pipeline and software. [[Image:1000Genomes march2012 imputation analysis plan 08312012.pdf]]
This is the typical DIAGRAM analysis using your current association pipeline and software. [[Image:1000Genomes march2012 imputation analysis plan 08312012.pdf]]
==== Alternative: Analyze VCF and PED files using the Wald test ====
=== 2. Analysis of low frequency variants using Firth bias-corrected logistic regression ===
=== 2. Analysis of low frequency variants using Firth bias-corrected logistic regression ===
