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324 bytes added ,  03:30, 12 June 2013
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== Cautious Sites ==
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== Sites to be Careful About ==
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333 exome chip variants sites should be treated cautiously.  
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Peter Chines, working with Francis Collins, provided a list of 333 exome chip variants sites that should be treated with caution. The sites include variants for which the SNP probe differs from the expected reference genome sequence, could not be mapped back to the reference, mapped to multiple places, or where neither allele matches the reference genome.
Refer to this plain text files of those sites [ftp://share.sph.umich.edu/exomeChip/IlluminaDesigns/cautiousSites/cautiousSite.sorted.sites list] and [ftp://share.sph.umich.edu/exomeChip/IlluminaDesigns/cautiousSites/cautiousSite.sorted.README descriptions].
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A plain text list of these sites [ftp://share.sph.umich.edu/exomeChip/IlluminaDesigns/cautiousSites/cautiousSite.sorted.sites list] and corresponding [ftp://share.sph.umich.edu/exomeChip/IlluminaDesigns/cautiousSites/cautiousSite.sorted.README descriptions] are available.
    
= Affymetrix Exome Arrays =
 
= Affymetrix Exome Arrays =

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