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29 bytes added ,  14:17, 11 April 2013
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The following equation gives the estimate of F where genotype likelihoods are available. <math>P(R_{k} |G_{i,j})</math> is the genotype likelihood for individual  <math>k</math> given genotype <math>G_{i,j}</math>.  This is basically the probability of observing the reads individual <math>k</math> assuming <math>G_{i,j}</math> is the underlying true genotype.
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The following equation gives the estimate of F where genotype likelihoods are available. <math>P(R_{k} |G_{i,j})</math> is the genotype likelihood for individual  <math>k</math> given genotype <math>G_{i,j}</math>.  This is basically the probability of observing the reads in individual <math>k</math> assuming <math>G_{i,j}</math> is the underlying true genotype for that particular locus.
    
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