Changes

== Get geneZoom Source Codes ==

== Get geneZoom Source Codes ==

=== Download from GitHub with Git ===

=== Download from GitHub with Git ===

After you unzip, you can find 3 directories in "geneZoom" (./example  ./lib  ./scripts ./ref).

After you unzip, you can find 3 directories in "geneZoom" (./example  ./lib  ./scripts ./ref).

== Basic Usage Example ==

== Basic Usage Example ==

== Parameters ==

== Parameters ==

'''vcf''': The VCF file has SNP information. This VCF must have header with sample ID.

'''vcf''': The VCF file has SNP information. This VCF must have header with sample ID. It can be a gz file or ASCII file.

'''gene''': The gene region will be plotted. For example, "PCSK9".

'''gene''': The gene region will be plotted. For example, "PCSK9".

== Acknowledgements  ==

== Acknowledgements  ==

geneZoom is the result of collaborative efforts by Cristen Willer, Jin Chen, He zhang, Ellen Schmidt, Wei Zhou, and Goncalo Abecasis. Please email Cristen Willer [cristen@umich.edu] with any questions.

'''geneZoom''' is the result of collaborative efforts by Cristen Willer, Jin Chen, He zhang, Ellen Schmidt, Wei Zhou, and Goncalo Abecasis. Please email Cristen Willer [cristen@umich.edu] with any questions.