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, 04:28, 16 September 2014
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| == Parameters == | | == Parameters == |
− | vcf: The VCF file has SNP information. This VCF must have header with sample ID. | + | '''vcf''': The VCF file has SNP information. This VCF must have header with sample ID. |
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− | gene: The gene region will be plotted. For example, "PCSK9". | + | ''gene'': The gene region will be plotted. For example, "PCSK9". |
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| phenotypeFile: The phenotype has phenotype value and sample ID. This file must have header to spcify which colum is phenotype value and sample ID. | | phenotypeFile: The phenotype has phenotype value and sample ID. This file must have header to spcify which colum is phenotype value and sample ID. |
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| outDIR The result directory. All intermediate files and result plot | | outDIR The result directory. All intermediate files and result plot |
| file are in this folder. | | file are in this folder. |
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| == Testing geneZoom == | | == Testing geneZoom == |