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92 bytes removed ,  16:14, 25 September 2013
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   --maxDepth      ''threshold''      Positions where the read depth exceeds this threshold will be excluded.
 
   --maxDepth      ''threshold''      Positions where the read depth exceeds this threshold will be excluded.
 
   --reference                    Positions called as homozygous reference will be included in the output.
 
   --reference                    Positions called as homozygous reference will be included in the output.
  --uniformTsTv                  Use a uniform prior for transition-to-transversion ratio.
      
To learn about default values for these options, simply run the program with no arguments.
 
To learn about default values for these options, simply run the program with no arguments.
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